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Getting Started

  • Quick Start
  • MultiFactor Authentication (MFA)
  • CSD3 Host Keys
  • Policies
  • References and further reading
  • Getting Support on CSD3

Dawn/AIRR/Zenith

  • Dawn - Intel GPU (PVC) Nodes
  • PI Dawn Access
  • User Dawn Access
  • Running jobs on Dawn
  • Dawn - Jupyter ondemand
  • Dawn - VSCode using SSH Tunnels
  • Dawn - Machine Learning & Data Science frameworks
  • Zenith Quick Start Guide

CSD3 User Guide

  • Connecting to CSD3
  • Login-Web Interface
  • Connecting to CSD3 via TurboVNC (3D Visualisation)
  • Running Jobs on CSD3
  • Cascade Lake Nodes
  • Ice Lake Nodes
  • Ampere GPU Nodes
  • Sapphire Rapid Nodes
  • Sapphire Rapid Nodes with High Bandwidth Memory
  • WBIC-HPHI Platform End-of-Life
  • End of SBS allocation scheme
  • Long jobs
  • Interactive use
  • Modules Environment
  • Using Spack
  • Using Python
  • Performance Tips
  • File and I/O Management
  • Data Transfer Guide

Applications

  • AlphaFold
  • GROMACS
  • LAMMPS Molecular Dynamics Simulator
  • MATLAB
  • PyTorch
  • Jupyter Notebooks
  • OpenFOAM
  • OpenMM
  • Tensorflow
  • R and Rscript
CSD3
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